Table of Contents          

SYLLABUS   ASSIGNMENT 1  

Extra Reading Material and Resources

http://www.rcsb.org/pdb/ (the protein data bank)

http://www.ruppweb.org/Xray/101index.html   (X-ray crystallography basics)

http://www-structmed.cimr.cam.ac.uk/course.html   (More in-depth x-ray crystallography)

http://blanco.biomol.uci.edu/Membrane_Proteins_xtal.html (Membrane proteins of known Structure)

http://blanco.biomol.uci.edu/mpex/ (membrane protein explorer for hydropathy plots etc.)

http://www.lipidat.tcd.ie/ (LipiData bank)

http://www.lmsd.tcd.ie/  (Lipid Molecular Structure Database)

http://www.lipidag.tcd.ie/  (LipiDag solubility data)

http://lipidlibrary.aocs.org/  (Lipid Library)

http://www.cgl.ucsf.edu/chimera/download.html (Graphics program for viewing structures)

http://www.pymol.org/ (Graphics program for viewing structures)

Final report guide    Example report  Example Presentation Criteria for Structure Paper

Section	Date	Subject	Presentation	Presenter	Papers
1	Jan 15 & 17	Membranes and Membrane Proteins		M Stowell
2	Jan 22 & 24	Biophysical Methods		M Stowell
3	Jan 29 & 31	Br, Hr, GPCR's		M Bull
4	Feb 5 & 7	NO CLASS: IM Conference
5	Feb 12 & 14	Photosystem I+II, LHCI+II, PRC		M Stowell
6	Feb 19 & 21	Cytochrome Oxidase, BC1 complex		T Baily
7	Feb 26 & 28	Complex II, Formate Dehydrogenase		M Narayan
8	Mar 5 & 7	ATP-Synthase, Ca++ ATPase		M Alsberg
9	Mar 12 & 14	Potassium Channels, Sodium Channels		M S
10	Mar 18 & 20	Aquaporins, Glpf, NH4+		P Larkin
11	Mar 26 & 28	NO CLASS: Spring Break
12	Apr 2 & 4	ABC-Cassette transporters, EMre
13	Apr 9 & 11	Snares and Vesicle Fusion
14	Apr 16 & 18	Chloride Channel , Gap junction		M Madsen
15	Apr 23 & 25	Ligand Gated Ion Channels , AchR, NMDA		A Dharmarajan
16	Apr 30 & May 2	SecYEG protein channel, LacPermease
17	May 7 & 9	NO CLASS: Finals